Daisuke Kiga : rechercher sur Z-Library

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1

RTRACS: A Modularized RNA-Dependent RNA Transcription System with High Programmability

Ayukawa, Shotaro, Takinoue, Masahiro, Kiga, Daisuke

Journal:

Accounts of Chemical Research

Année:

2011

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2011

2

In vitro selection of a photoresponsive peptide aptamer to glutathione-immobilized microbeads

Tada, Seiichi, Zang, Qingmin, Wang, Wei, Kawamoto, Masuki, Liu, Mingzhe, Iwashita, Michiru, Uzawa, Takanori, Kiga, Daisuke, Yamamura, Masayuki, Ito, Yoshihiro

Journal:

Journal of Bioscience and Bioengineering

Année:

2015

Langue:

english

Fichier:

PDF, 404 KB

english, 2015

3

Horizontal transfer of code fragments between protocells can explain the origins of the genetic code without vertical descent

Froese, Tom, Campos, Jorge I., Fujishima, Kosuke, Kiga, Daisuke, Virgo, Nathaniel

Journal:

Scientific Reports

Année:

2018

Langue:

english

Fichier:

PDF, 3.19 MB

english, 2018

4

DNA polymerase programmed with a hairpin DNA incorporates a multiple-instruction architecture into molecular computing

Ken Komiya, Kensaku Sakamoto, Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi, Daisuke Kiga, Shigeyuki Yokoyama, Masami Hagiya

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 240 KB

english, 2006

5

Shifted positioning of the anticodon nucleotide residues of amber suppressor tRNA species by Escherichia coli arginyl-tRNA synthetase

Daisuke Kiga, Kensaku Sakamoto, Saori Sato, Ichiro Hirao, Shigeyuki Yokoyama

Journal:

Année:

2001

Langue:

english

Fichier:

PDF, 793 KB

english, 2001

6

RNA Oscillator: Limit Cycle Oscillations based on Artificial Biomolecular Reactions

Masahiro Takinoue, Daisuke Kiga, Koh-ichiroh Shohda, Akira Suyama

Journal:

New Generation Computing

Année:

2009

Langue:

english

Fichier:

PDF, 1.05 MB

english, 2009

7

Synthetic Biology

Daisuke Kiga, Masayuki Yamamura

Journal:

New Generation Computing

Année:

2008

Langue:

english

Fichier:

PDF, 784 KB

english, 2008

8

Translation of ‘rare’ Codons in a Cell-free Protein Synthesis System fromEscherichia coli

Namthip Chumpolkulwong, Kensaku Sakamoto, Akiko Hayashi, Fumie Iraha, Naoko Shinya, Natsuko Matsuda, Daisuke Kiga, Akiko Urushibata, Mikako Shirouzu, Kenji Oki, Takanori Kigawa, Shigeyuki Yokoyama

Journal:

Journal of Structural and Functional Genomics

Année:

2006

Langue:

english

Fichier:

PDF, 163 KB

english, 2006

9

A design and feasibility study of reactions comprising DNA molecular machine that walks autonomously by using a restriction enzyme

Hiroyuki Sekiguchi, Ken Komiya, Daisuke Kiga, Masayuki Yamamura

Journal:

Natural Computing

Année:

2008

Langue:

english

Fichier:

PDF, 606 KB

english, 2008

10

State transitions by molecules

Kensaku Sakamoto, Daisuke Kiga, Ken Komiya, Hidetaka Gouzu, Shigeyuki Yokoyama, Shuji Ikeda, Hiroshi Sugiyama, Masami Hagiya

Journal:

Année:

1999

Langue:

english

Fichier:

PDF, 219 KB

english, 1999

11

Construction of a genetic AND gate under a new standard for assembly of genetic parts

Shotaro Ayukawa, Akio Kobayashi, Yusaku Nakashima, Hidemasa Takagi, Shogo Hamada, Masahiko Uchiyama, Katsuyuki Yugi, Satoshi Murata, Yasubumi Sakakibara, Masami Hagiya, Masayuki Yamamura, Daisuke Kiga

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 603 KB

english, 2010

12

Cation−π Interaction in the Polyolefin Cyclization Cascade Uncovered by Incorporating Unnatural Amino Acids into the Catalytic Sites of Squalene Cyclase

Morikubo, Noriko, Fukuda, Yoriyuki, Ohtake, Kazumasa, Shinya, Naoko, Kiga, Daisuke, Sakamoto, Kensaku, Asanuma, Miwako, Hirota, Hiroshi, Yokoyama, Shigeyuki, Hoshino, Tsutomu

Journal:

Journal of the American Chemical Society

Année:

2006

Langue:

english

Fichier:

PDF, 283 KB

english, 2006

13

The number of amino acids in a genetic code

Amikura, Kazuaki, Kiga, Daisuke

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 480 KB

english, 2013

14

Multiple Amino Acid-Excluded Genetic Codes for Protein Engineering Using Multiple Sets of tRNA Variants

Amikura, Kazuaki, Sakai, Yoko, Asami, Shun, Kiga, Daisuke

Journal:

ACS Synthetic Biology

Année:

2014

Langue:

english

Fichier:

PDF, 3.07 MB

english, 2014

15

General Applicability of Synthetic Gene-Overexpression for Cell-Type Ratio Control via Reprogramming

Ishimatsu, Kana, Hata, Takashi, Mochizuki, Atsushi, Sekine, Ryoji, Yamamura, Masayuki, Kiga, Daisuke

Journal:

ACS Synthetic Biology

Année:

2014

Langue:

english

Fichier:

PDF, 1.99 MB

english, 2014

16

An aptazyme-based molecular device that converts a small-molecule input into an RNA output

Ayukawa, Shotaro, Sakai, Yoko, Kiga, Daisuke

Journal:

Chemical Communications

Année:

2012

Langue:

english

Fichier:

PDF, 1.92 MB

english, 2012

17

Experiments and simulation models of a basic computation element of an autonomous molecular computing system

Takinoue, Masahiro, Kiga, Daisuke, Shohda, Koh-ichiroh, Suyama, Akira

Journal:

Physical Review E

Année:

2008

Langue:

english

Fichier:

PDF, 445 KB

english, 2008

18

Tunable synthetic phenotypic diversification on Waddington's landscape through autonomous signaling

Ryoji Sekine, Masayuki Yamamura, Shotaro Ayukawa, Kana Ishimatsu, Satoru Akama, Masahiro Takinoue, Masami Hagiya and Daisuke Kiga

Journal:

Proceedings of the National Academy of Sciences

Année:

2011

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2011

19

Experimental Evolution of a Green Fluorescent Protein Composed of 19 Unique Amino Acids without Tryptophan

Kawahara-Kobayashi, Akio, Hitotsuyanagi, Mitsuhiro, Amikura, Kazuaki, Kiga, Daisuke

Journal:

Origins of Life and Evolution of Biospheres

Année:

2014

Langue:

english

Fichier:

PDF, 361 KB

english, 2014

20

Two site genetic incorporation of varying length polyethylene glycol into the backbone of one peptide

Zang, Qingmin, Tada, Seiichi, Uzawa, Takanori, Kiga, Daisuke, Yamamura, Masayuki, Ito, Yoshihiro

Journal:

Chemical Communications

Année:

2015

Langue:

english

Fichier:

PDF, 754 KB

english, 2015

21

Tunability of the ratio of cell states after the synthetic diversification by the diversity generator

Sekine, Ryoji, Yamamura, Masayuki, Hagiya, Masami, Kiga, Daisuke

Journal:

Communicative & Integrative Biology

Année:

2012

Langue:

english

Fichier:

PDF, 434 KB

english, 2012

22

Effects of downstream genes on synthetic genetic circuits

Moriya, Takefumi, Yamamura, Masayuki, Kiga, Daisuke

Journal:

BMC Systems Biology

Année:

2014

Langue:

english

Fichier:

PDF, 2.19 MB

english, 2014

23

A Bacterial Continuous Culture System Based on a Microfluidic Droplet Open Reactor

ITO, Manami, SUGIURA, Haruka, AYUKAWA, Shotaro, KIGA, Daisuke, TAKINOUE, Masahiro

Journal:

Analytical Sciences

Année:

2016

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2016

24

[ACM Press the 7th International Conference - Macau, Macao (2016.12.19-2016.12.22)] Proceedings of the 7th International Conference on Computational Systems-Biology and Bioinformatics - CSBio '16 - High-frequency Noise Attenuation of a Two-component System Responding to Short-pulse Input

Nishida, Akifumi, Sekine, Ryoji, Kiga, Daisuke, Yamamura, Masayuki

Année:

2016

Langue:

english

Fichier:

PDF, 881 KB

english, 2016

25

Escherichia coli expression, purification, and refolding of human folate receptor α (hFRα) and β (hFRβ)

Dharmatti, Roopa, Miyatake, Hideyuki, Zhang, Chen, Ren, Xueli, Yumoto, Akiko, Kiga, Daisuke, Yamamura, Masayuki, Ito, Yoshihiro

Journal:

Protein Expression and Purification

Année:

2018

Langue:

english

Fichier:

PDF, 1.24 MB

english, 2018

26

2P280 Autonomous DNA computing in cell-sized liposome(Native and artificial biomembranes-dynamics,Poster Presentations)

Shoda, Koh-ichiro, Kiga, Daisuke, Takinoue, Masahiro, Toyota, Taro, Kageyama, Yoshiyuki, Sugawara, Tadashi, Suyama, Akira

Journal:

Seibutsu Butsuri

Année:

2007

Fichier:

PDF, 238 KB

2007

27

2P478 Oscillatory feedback network constructed with an autonomous molecular computing system(50. Non-equilibrium and complex system,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Takinoue, Masahiro, Kiga, Daisuke, Shohda, Koh-ichiroh, Suyama, Akira

Journal:

Seibutsu Butsuri

Année:

2006

Langue:

english

Fichier:

PDF, 155 KB

english, 2006

28

2P572 Autonomous DNA computer for SNP analysis(53. Bioengineering,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Kiga, Daisuke, Takinoue, Masahiro, Shohda, Koh-ichiroh, Suyama, Akira

Journal:

Seibutsu Butsuri

Année:

2006

Langue:

english

Fichier:

PDF, 163 KB

english, 2006

29

S02I1 Molecular computing and molecular communication : synthetic approach using biomolecules(Molecular Computing and Molecular Communication: New Computing and Communication Systems Using Biological Functions)

Journal:

Seibutsu Butsuri

Année:

2007

Fichier:

PDF, 207 KB

2007

30

2SL-04 Tunable synthetic phenotypic diversification on Waddington's landscape through autonomous signaling(2SL Information processing of biological systems,The 49th Annual Meeting of the Biophysical Society of Japan)

Sekine, Ryoji, Yamamura, Masayuki, Ayukawa, Shotaro, Ishimatsu, Kana, Akama, Satoru, Takinoue, Masahiro, Hagiya, Masami, Kiga, Daisuke

Journal:

Seibutsu Butsuri

Année:

2011

Langue:

english

Fichier:

PDF, 225 KB

english, 2011

31

2P280 Effects of downstream reporter genes on synthetic genetic circuits(24. Mathematical biology,Poster)

Moriya, Takefumi, Yamamura, Masayuki, Kiga, Daisuke

Journal:

Seibutsu Butsuri

Année:

2014

Langue:

english

Fichier:

PDF, 694 KB

english, 2014

32

2P471 A liposome containing an autonomous DNA computing system inside(50. Non-equilibrium and complex system,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Shohda, Koh-ichiroh, Kiga, Daisuke, Takinoue, Masahiro, Kageyama, Yoshiyuki, Sugawara, Tadashi, Suyama, Akira

Journal:

Seibutsu Butsuri

Année:

2006

Langue:

english

Fichier:

PDF, 156 KB

english, 2006

33

1P335 Construction of in vitro proteosynthesis molecular automaton(Bioengineering,Poster Presentations)

Lee, Young-Hun, Shohda, Koh-ichiroh, Kiga, Daisuke, Suyama, Akira

Journal:

Seibutsu Butsuri

Année:

2007

Langue:

english

Fichier:

PDF, 225 KB

english, 2007

34

Constraint-based perturbation analysis with cluster Newton method: a case study of personalized parameter estimations with irinotecan whole-body physiologically based pharmacokinetic model

Asami, Shun, Kiga, Daisuke, Konagaya, Akihiko

Journal:

BMC Systems Biology

Année:

2017

Langue:

english

Fichier:

PDF, 1.60 MB

english, 2017

35

1P302 Oscillatory system constructed with autonomous DNA/RNA molecular reactions(Mathematical biology, biological rythms, and non-equilibrium phenomena,Oral Presentations)

Takinoue, Masahiro, Kiga, Daisuke, Shohda, Koh-ichiroh, Suyama, Akira

Journal:

Seibutsu Butsuri

Année:

2007

Langue:

english

Fichier:

PDF, 229 KB

english, 2007

36

SAE Technical Paper Series [SAE International Powertrains, Fuels and Lubricants Meeting - (JUN. 15, 2009)] SAE Technical Paper Series - Lubrication Technology and Analysis for Variable Valve Event and Lift (VVEL) System

Akasaka, Yuzou, Kiga, Shinichi, Kobayashi, Makoto, Watanabe, Daisuke

Année:

2009

Langue:

english

Fichier:

PDF, 3.91 MB

english, 2009

37

Comparison between Effects of Retroactivity and Resource Competition upon Change in Downstream Reporter Genes of Synthetic Genetic Circuits

Moriya, Takefumi, Yamaoka, Tomohiro, Wakayama, Yuki, Ayukawa, Shotaro, Zhang, Zicong, Yamamura, Masayuki, Wakao, Shinji, Kiga, Daisuke

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 4.39 MB

english, 2019

38

Comparison between Effects of Retroactivity and Resource Competition upon Change in Downstream Reporter Genes of Synthetic Genetic Circuits

Moriya, Takefumi, Yamaoka, Tomohiro, Wakayama, Yuki, Ayukawa, Shotaro, Zhang, Zicong, Yamamura, Masayuki, Wakao, Shinji, Kiga, Daisuke

Journal:

Année:

2019

Fichier:

PDF, 4.39 MB

2019

39

Robust estimation of bacterial cell count from optical density

Beal, Jacob, Farny, Natalie G., Haddock-Angelli, Traci, Selvarajah, Vinoo, Baldwin, Geoff S., Buckley-Taylor, Russell, Gershater, Markus, Kiga, Daisuke, Marken, John, Sanchania, Vishal, Sison, Abigail

Journal:

Communications Biology

Année:

2020

Fichier:

PDF, 1.39 MB

2020

40

Author Correction: Robust estimation of bacterial cell count from optical density

Beal, Jacob, Farny, Natalie G., Haddock-Angelli, Traci, Selvarajah, Vinoo, Baldwin, Geoff S., Buckley-Taylor, Russell, Gershater, Markus, Kiga, Daisuke, Marken, John, Sanchania, Vishal, Sison, Abigail

Journal:

Communications Biology

Année:

2020

Fichier:

PDF, 457 KB

2020